Tag Archives: Database

DC-RESEARCH.EU

Posted on November 23, 2010 by sgtp

DC-RESEARCH.EU is a system that aims at representing the communication and know-how proper of a research networks. DC-RESEARCH.EU has been developed in the context of the network DC-THERA by Leaf Bioscience s.r.l., in collaboration with other participants in the network. DC-RESEARCH.EU stores synthetic … Continue reading →

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PHI-Base

Posted on November 23, 2010 by sgtp

I am involved in the re-design of the Host Pathogen Interaction database PHI-BASE, where I have devised a new information model and a new database schema. Rather than focusing on “storing” the data, the new information model makes explicit the … Continue reading →

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The Genopolis Microarray Database

Posted on November 13, 2010 by sgtp

The Genopolis Microarray Database originated as custom microarray database project for Affymetrix GeneChip data, supporting an homogeneous community studying dendritic cells differentiation. It is based on an object model MAGEcompliant, and provides support for MIAME annotation, export to ArrayExpress as … Continue reading →

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DC-THERA Directory, a Knowledge Management System for the support of the European Dendritic Cell Immunology Community (Demo paper)

Posted on November 20, 2009 by sgtp

Marco Brandizi, Michaela Gündel, Ciro Scognamiglio and Andrea Splendiani DC-THERA Directory, a Knowledge Management System for the support of the European Dendritic Cell Immunology Community (Demo paper) In Proceedings of Semantic Applications and Tools for Life Sciences (SWAT4LS 2009)

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The Genopolis Microarray Database

Posted on March 8, 2007 by sgtp

Splendiani A, Brandizi B, Even G, Beretta O, Pavelka N, Pelizzola M, Foti M, Mauri G, Ricciardi-Castagnoli P. The Genopolis Microarray Database BMC Bioinformatics 2007 Mar 8, 8(Suppl 1):S22 Abstract Background Gene expression databases are key resources for microarray data … Continue reading →

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Integration of ontologies and high-throughput data in bioinformatics

Posted on July 10, 2006 by sgtp

Integration of ontologies and high-throughput data in bioinformatics (PhD Thesis) Available here

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An introduction to Microarray Databases (Tutorial)

Posted on June 1, 2003 by sgtp

At the Embo Course on Functional Genomics, University of Milano Bicocca, 2003. The pdf of the presentation is available here.

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