Tag Archives: Reasoning

RDFScape: Semantic Web meets Systems Biology

Splendiani A RDFScape: Semantic Web meets Systems Biology (selected In IMIA Yearbook of Medical Informatics) BMC Bioinformatics 2008 Apr 25, 9 (S4):S6 Abstract BACKGROUND The recent availability of high-throughput data in molecular biology has increased the need for a formal … Continue reading

Posted in Journal Papers | Tagged , , , | Leave a comment

RDFScape

RDFScape originated as an attempt to “merge” Cytoscape, a popular network analysis software, ¬†with Semantic Web technologies. In its original design, RDFScape was including a variety of experimental features: Cytoscape-based interactive visual interface for RDF-based knowledge bases Interactive visual SPARQL … Continue reading

Posted in Biomedical ontologies and representation of Biological Pathways, Ontology based data analysis, Visualisation and User Interaction on the Semantic Web | Tagged , , , , , , | Leave a comment

Semantic browsing of pathway ontologies and biological networks with RDFScape (working paper)

In Dagstuhl proceedings, 2006 Continue reading

Posted in Proceedings | Tagged , , , , , | Leave a comment